EnhancerDB
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  3. rs562198277[chr1:42212825]
Enhancers that have rs562198277[chr1:42212825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs562198277[chr1:42212825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42212814 42212827 SMAD2 JASPAR yes 28416903
chr1 42212816 42212837 ZNF263 JASPAR yes 28416904
chr1 42212819 42212840 ZNF263 JASPAR yes 28416905
chr1 42212820 42212841 ZNF263 JASPAR yes 28416906
chr1 42212823 42212838 NR2C2 JASPAR yes 28416907
Genes associated with rs562198277[chr1:42212825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More