EnhancerDB
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  3. rs562272734[chr16:2899797]
Enhancers that have rs562272734[chr16:2899797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2883745 2901765 enh16505
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs562272734[chr16:2899797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2899334 2899825 TCF7L2 GTRD no Colon (HCT116) 21685259
chr16 2899375 2900119 ZNF143 GTRD no Epithelial (MCF-7) 21685260
chr16 2899397 2900239 ZNF143 GTRD no Epithelial (MCF-7) 21685261
chr16 2899599 2899992 ZNF274 GTRD no Bone Marrow (K562) 21685262
chr16 2899632 2899966 ZNF143 GTRD no Epithelial (MCF-7) 21685263
chr16 2899789 2899800 GCM1 JASPAR yes 9193806
chr16 2899795 2899800 SP1 TRANSFAC yes 9193807
chr16 2899796 2899810 PLAG1 JASPAR yes 9193808
chr16 2899796 2899811 NR2C2 JASPAR yes 9193809
Genes associated with rs562272734[chr16:2899797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More