EnhancerDB
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  3. rs562328704[chr2:231560561]
Enhancers that have rs562328704[chr2:231560561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 231540245 231567455 enh19309
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs562328704[chr2:231560561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 231560552 231560562 NEUROG2 JASPAR yes 81673539
chr2 231560554 231560575 IRF1 JASPAR yes 81673540
chr2 231560555 231560570 FOXP1 JASPAR yes 81673541
chr2 231560555 231560576 IRF1 JASPAR yes 81673542
chr2 231560556 231560567 FOXP2 JASPAR yes 81673543
chr2 231560556 231560571 STAT2 JASPAR yes 81673544
chr2 231560557 231560572 FOXP1 JASPAR yes 81673545
chr2 231560557 231560578 IRF1 JASPAR yes 81673546
chr2 231560560 231560575 FOXP1 JASPAR yes 81673547
chr2 231560561 231560576 FOXP1 JASPAR yes 81673548
Genes associated with rs562328704[chr2:231560561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More