EnhancerDB
  1. Home
  2. SNP
  3. rs562417269[chr1:11943130]
Enhancers that have rs562417269[chr1:11943130]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 11938105 11949624 enh42885
Bone Marrow (K562) Liver (HepG2) Stomach Thyroid Muscle (Myotube) Heart
chr1 11940877 11944112 vista17
VISTA
chr1 11942925 11943217 vista369
VISTA
Transcript factors that have rs562417269[chr1:11943130]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 11942546 11944160 TCF7L2 GTRD no Colon (HCT116) 107802082
chr1 11943110 11943131 REST JASPAR yes 26788239
chr1 11943110 11943131 REST JASPAR yes 71122906
chr1 11943110 11943131 REST JASPAR yes 118230661
chr1 11943111 11943130 REST JASPAR yes 26788240
chr1 11943111 11943130 REST JASPAR yes 71122907
chr1 11943111 11943130 REST JASPAR yes 118230662
chr1 11943115 11943130 RFX5 JASPAR yes 26788241
chr1 11943115 11943130 RFX5 JASPAR yes 71122908
chr1 11943115 11943130 RFX5 JASPAR yes 118230663
chr1 11943123 11943131 TBX5 JASPAR yes 26788242
chr1 11943123 11943131 TBX5 JASPAR yes 71122909
chr1 11943123 11943131 TBX5 JASPAR yes 118230664
chr1 11943123 11943132 ZEB1 JASPAR yes 26788243
chr1 11943123 11943132 ZEB1 JASPAR yes 71122910
chr1 11943123 11943132 ZEB1 JASPAR yes 118230665
chr1 11943124 11943134 ID4 JASPAR yes 26788244
chr1 11943124 11943134 NHLH1 JASPAR yes 26788245
chr1 11943124 11943134 TCF3 JASPAR yes 26788246
chr1 11943124 11943134 TCF4 JASPAR yes 26788247
chr1 11943124 11943134 ID4 JASPAR yes 71122911
chr1 11943124 11943134 NHLH1 JASPAR yes 71122912
chr1 11943124 11943134 TCF3 JASPAR yes 71122913
chr1 11943124 11943134 TCF4 JASPAR yes 71122914
chr1 11943124 11943134 ID4 JASPAR yes 118230666
chr1 11943124 11943134 NHLH1 JASPAR yes 118230667
chr1 11943124 11943134 TCF3 JASPAR yes 118230668
chr1 11943124 11943134 TCF4 JASPAR yes 118230669
chr1 11943125 11943134 SNAI2 JASPAR yes 26788248
chr1 11943125 11943134 SNAI2 JASPAR yes 71122915
chr1 11943125 11943134 SNAI2 JASPAR yes 118230670
chr1 11943126 11943131 USF2 TRANSFAC yes 26788249
chr1 11943126 11943131 USF2 TRANSFAC yes 71122916
chr1 11943126 11943131 USF2 TRANSFAC yes 118230671
Genes associated with rs562417269[chr1:11943130], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More