EnhancerDB
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  3. rs562486870[chr1:17220918]
Enhancers that have rs562486870[chr1:17220918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs562486870[chr1:17220918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17220914 17220919 SP1 TRANSFAC yes 27062385
chr1 17220915 17220925 SP1 JASPAR yes 27062386
chr1 17220917 17220929 INSM1 JASPAR yes 27062387
Genes associated with rs562486870[chr1:17220918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More