EnhancerDB
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  3. rs56252230[chr1:42188572]
Enhancers that have rs56252230[chr1:42188572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs56252230[chr1:42188572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42188553 42188574 IRF1 JASPAR yes 28413858
chr1 42188557 42188572 PRDM1 JASPAR yes 28413864
chr1 42188557 42188572 STAT2 JASPAR yes 28413865
chr1 42188558 42188579 ZNF263 JASPAR yes 28413866
chr1 42188560 42188573 SMAD2 JASPAR yes 28413867
chr1 42188561 42188582 ZNF263 JASPAR yes 28413868
chr1 42188567 42188582 PRDM1 JASPAR yes 28413869
Genes associated with rs56252230[chr1:42188572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More