EnhancerDB
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  3. rs56252944[chr12:52559511]
Enhancers that have rs56252944[chr12:52559511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs56252944[chr12:52559511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52559265 52559781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546575
chr12 52559265 52559781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033425
chr12 52559294 52559584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546576
chr12 52559294 52559584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033426
chr12 52559501 52559514 TFAP2A JASPAR yes 120924405
chr12 52559506 52559511 SP1 TRANSFAC yes 120924406
Genes associated with rs56252944[chr12:52559511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More