EnhancerDB
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  3. rs562539116[chr1:180279639]
Enhancers that have rs562539116[chr1:180279639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180275825 180282838 enh27291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs562539116[chr1:180279639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180279629 180279641 FOXI1 JASPAR yes 33510743
chr1 180279630 180279643 POU2F2 JASPAR yes 33510744
chr1 180279639 180279648 POU3F4 JASPAR yes 33510746
Genes associated with rs562539116[chr1:180279639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More