EnhancerDB
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  3. rs562540564[chr1:55914002]
Enhancers that have rs562540564[chr1:55914002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55906685 55916255 enh11882
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs562540564[chr1:55914002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55914002 55914006 NFE TRANSFAC yes 29039442
chr1 55914002 55914007 GATA1 TRANSFAC yes 29039443
chr1 55914002 55914008 GATA3 JASPAR yes 29039444
Genes associated with rs562540564[chr1:55914002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More