EnhancerDB
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  3. rs562540659[chr2:235047160]
Enhancers that have rs562540659[chr2:235047160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235039533 235050615 enh19335
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs562540659[chr2:235047160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235047152 235047160 MEIS3 JASPAR yes 81848332
chr2 235047154 235047165 USF1 JASPAR yes 81848334
chr2 235047154 235047165 USF2 JASPAR yes 81848335
chr2 235047154 235047166 PKNOX1 JASPAR yes 81848336
chr2 235047154 235047166 PKNOX2 JASPAR yes 81848337
chr2 235047154 235047166 TGIF1 JASPAR yes 81848338
chr2 235047154 235047166 TGIF2 JASPAR yes 81848339
chr2 235047155 235047165 TFEB JASPAR yes 81848340
Genes associated with rs562540659[chr2:235047160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More