EnhancerDB
  1. Home
  2. SNP
  3. rs562561308[chr1:25347855]
Enhancers that have rs562561308[chr1:25347855]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs562561308[chr1:25347855]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25347843 25347862 REST JASPAR yes 27554500
chr1 25347850 25347855 TFAP2A TRANSFAC yes 27554501
chr1 25347850 25347856 MZF1 JASPAR yes 27554502
chr1 25347855 25347876 ZNF263 JASPAR yes 27554503
Genes associated with rs562561308[chr1:25347855], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More