EnhancerDB
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  3. rs562570710[chr1:117035223]
Enhancers that have rs562570710[chr1:117035223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562570710[chr1:117035223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117034508 117035477 ZNF143 GTRD no Epithelial (MCF-7) 21333054
chr1 117034672 117035302 ZNF143 GTRD no Epithelial (MCF-7) 21333056
chr1 117034778 117035228 ZNF143 GTRD no Epithelial (MCF-7) 21333058
chr1 117035171 117035535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333061
chr1 117035195 117035599 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333062
chr1 117035217 117035228 PHOX2A JASPAR yes 31813367
chr1 117035217 117035228 PROP1 JASPAR yes 31813368
chr1 117035222 117035498 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333063
Genes associated with rs562570710[chr1:117035223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More