EnhancerDB
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  3. rs562580854[chr3:124316717]
Enhancers that have rs562580854[chr3:124316717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124309245 124355975 enh20876
Bone Marrow (K562) Liver Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs562580854[chr3:124316717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124316710 124316720 EMX1 JASPAR yes 5387054
chr3 124316710 124316720 EMX2 JASPAR yes 5387055
chr3 124316710 124316720 GSX1 JASPAR yes 5387056
chr3 124316710 124316720 HOXB3 JASPAR yes 5387057
chr3 124316710 124316720 LHX2 JASPAR yes 5387058
chr3 124316710 124316720 LHX6 JASPAR yes 5387059
chr3 124316710 124316720 MEOX1 JASPAR yes 5387060
chr3 124316710 124316720 MEOX2 JASPAR yes 5387061
chr3 124316710 124316720 POU6F1 JASPAR yes 5387062
chr3 124316711 124316719 LBX1 JASPAR yes 5387063
chr3 124316711 124316719 PDX1 JASPAR yes 5387064
chr3 124316711 124316719 VAX1 JASPAR yes 5387065
chr3 124316711 124316719 VAX2 JASPAR yes 5387066
chr3 124316711 124316719 VSX1 JASPAR yes 5387067
chr3 124316711 124316719 VSX2 JASPAR yes 5387068
chr3 124316713 124316721 HOXA5 JASPAR yes 5387069
Genes associated with rs562580854[chr3:124316717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More