EnhancerDB
  1. Home
  2. SNP
  3. rs562616075[chr1:42148425]
Enhancers that have rs562616075[chr1:42148425]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562616075[chr1:42148425]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42148424 42148430 ETS1 JASPAR yes 28409636
chr1 42148424 42148430 SPI1 JASPAR yes 28409637
Genes associated with rs562616075[chr1:42148425], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More