EnhancerDB
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  3. rs562629969[chr1:117033478]
Enhancers that have rs562629969[chr1:117033478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562629969[chr1:117033478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117033045 117033575 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333051
chr1 117033193 117033709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333052
chr1 117033470 117033488 RARA JASPAR yes 31813064
Genes associated with rs562629969[chr1:117033478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More