EnhancerDB
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  3. rs562746106[chr1:17240710]
Enhancers that have rs562746106[chr1:17240710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
chr1 17240188 17240783 vista545
VISTA
Transcript factors that have rs562746106[chr1:17240710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17240698 17240713 TFAP2C JASPAR yes 27065107
chr1 17240698 17240713 TFAP2C JASPAR yes 118239980
chr1 17240699 17240711 TFAP2A JASPAR yes 27065108
chr1 17240699 17240711 TFAP2B JASPAR yes 27065109
chr1 17240699 17240711 TFAP2C JASPAR yes 27065110
chr1 17240699 17240711 TFAP2A JASPAR yes 118239981
chr1 17240699 17240711 TFAP2B JASPAR yes 118239982
chr1 17240699 17240711 TFAP2C JASPAR yes 118239983
chr1 17240704 17240711 SP1 TRANSFAC yes 27065112
chr1 17240704 17240711 SP1 TRANSFAC yes 118239985
chr1 17240704 17240714 SP1 JASPAR yes 27065113
chr1 17240704 17240714 SP1 JASPAR yes 118239986
chr1 17240705 17240713 SP1 TRANSFAC yes 27065114
chr1 17240705 17240713 SP1 TRANSFAC yes 118239987
chr1 17240705 17240715 SP1 JASPAR yes 27065115
chr1 17240705 17240715 SP1 JASPAR yes 118239988
chr1 17240706 17240711 SP1 TRANSFAC yes 27065116
chr1 17240706 17240711 SP1 TRANSFAC yes 118239989
chr1 17240707 17240712 SP1 TRANSFAC yes 27065117
chr1 17240707 17240712 SP1 TRANSFAC yes 118239990
Genes associated with rs562746106[chr1:17240710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More