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- rs562828968[chr19:488396]
Enhancers that have rs562828968[chr19:488396]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
488227 |
488667 |
vista28087 |
|
|
Transcript factors that have rs562828968[chr19:488396]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
487255
|
490021
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343918
|
|
|
chr19
|
487314
|
488475
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343919
|
|
|
chr19
|
487329
|
489959
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343920
|
|
|
chr19
|
487788
|
489358
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343930
|
|
|
chr19
|
487819
|
489467
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343935
|
|
|
chr19
|
487843
|
490102
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343937
|
|
|
chr19
|
487858
|
489871
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108343938
|
|
|
chr19
|
487859
|
490278
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343939
|
|
|
chr19
|
487882
|
488401
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343940
|
|
|
chr19
|
488015
|
490207
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108343942
|
|
|
chr19
|
488179
|
490223
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108343945
|
|
|
chr19
|
488233
|
490024
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343947
|
|
|
chr19
|
488239
|
490203
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108343948
|
|
|
chr19
|
488240
|
490055
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343949
|
|
|
chr19
|
488242
|
489952
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108343950
|
|
|
chr19
|
488244
|
489704
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343951
|
|
|
chr19
|
488274
|
490229
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343952
|
|
|
chr19
|
488363
|
489337
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343953
|
|
|
chr19
|
488376
|
488955
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108343954
|
|
|
chr19
|
488381
|
490086
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343955
|
|
|
chr19
|
488385
|
489720
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108343956
|
|
|
chr19
|
488391
|
489902
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108343957
|
|
|
chr19
|
488393
|
489848
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343958
|
|
|
chr19
|
488394
|
490006
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108343959
|
|
Genes associated with rs562828968[chr19:488396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |