EnhancerDB
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  3. rs562859185[chr12:52558690]
Enhancers that have rs562859185[chr12:52558690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562859185[chr12:52558690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52558183 52558839 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546570
chr12 52558385 52558849 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546571
chr12 52558386 52558762 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546572
chr12 52558496 52559258 ZNF143 GTRD no Epithelial (MCF-7) 21546573
Genes associated with rs562859185[chr12:52558690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More