EnhancerDB
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  3. rs562932410[chr1:172612790]
Enhancers that have rs562932410[chr1:172612790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs562932410[chr1:172612790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172612692 172613002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350146
chr1 172612694 172612958 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350147
chr1 172612772 172612793 IRF1 JASPAR yes 33142921
chr1 172612776 172612790 STAT1 JASPAR yes 33142924
chr1 172612776 172612791 STAT2 JASPAR yes 33142925
chr1 172612776 172612794 IRF2 JASPAR yes 33142926
chr1 172612786 172612795 NKX3-2 JASPAR yes 33142928
Genes associated with rs562932410[chr1:172612790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More