EnhancerDB
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  3. rs562941364[chr17:2717771]
Enhancers that have rs562941364[chr17:2717771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2712160 2721479 enh32057
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs562941364[chr17:2717771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 21739705
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 108231232
chr17 2717694 2717964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231233
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 21739706
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 108231234
chr17 2717767 2717777 SP1 JASPAR yes 52774377
chr17 2717771 2717781 MZF1 JASPAR yes 52774378
Genes associated with rs562941364[chr17:2717771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More