EnhancerDB
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  3. rs562987295[chr1:54871841]
Enhancers that have rs562987295[chr1:54871841]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs562987295[chr1:54871841]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54871362 54873212 ZNF274 GTRD no Liver (HepG2) 107804945
chr1 54871823 54871844 ZNF263 JASPAR yes 28982704
chr1 54871831 54871841 SP1 JASPAR yes 28982708
chr1 54871832 54871842 SP1 JASPAR yes 28982709
chr1 54871834 54871849 TFAP2C JASPAR yes 28982710
chr1 54871835 54871845 ZNF740 JASPAR yes 28982711
chr1 54871835 54871848 TFAP2A JASPAR yes 28982712
chr1 54871835 54871848 TFAP2B JASPAR yes 28982713
chr1 54871835 54871848 TFAP2C JASPAR yes 28982714
chr1 54871836 54871848 TFAP2A JASPAR yes 28982715
chr1 54871836 54871848 TFAP2B JASPAR yes 28982716
chr1 54871836 54871848 TFAP2C JASPAR yes 28982717
chr1 54871837 54871848 TFAP2A JASPAR yes 28982718
chr1 54871837 54871848 TFAP2B JASPAR yes 28982719
chr1 54871838 54871847 TFAP2A JASPAR yes 28982720
Genes associated with rs562987295[chr1:54871841], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More