EnhancerDB
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  3. rs562990724[chr16:85406402]
Enhancers that have rs562990724[chr16:85406402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs562990724[chr16:85406402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85406205 85406865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21724387
chr16 85406310 85406766 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724388
chr16 85406341 85406737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21724389
chr16 85406344 85406740 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724390
chr16 85406348 85406658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724391
chr16 85406364 85406644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724392
chr16 85406372 85406736 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724393
chr16 85406378 85406702 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724394
chr16 85406383 85406693 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21724395
chr16 85406393 85406677 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724396
chr16 85406399 85406411 ZBTB7C JASPAR yes 12053446
chr16 85406399 85406679 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724397
chr16 85406400 85406660 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724398
chr16 85406402 85406407 SP1 TRANSFAC yes 12053447
chr16 85406402 85406411 HIC2 JASPAR yes 12053448
Genes associated with rs562990724[chr16:85406402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More