EnhancerDB
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  3. rs563154576[chr1:117005390]
Enhancers that have rs563154576[chr1:117005390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563154576[chr1:117005390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117005286 117005766 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332666
chr1 117005385 117005406 IRF1 JASPAR yes 31808951
chr1 117005387 117005402 PRDM1 JASPAR yes 31808952
chr1 117005387 117005402 STAT2 JASPAR yes 31808953
Genes associated with rs563154576[chr1:117005390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More