EnhancerDB
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  3. rs563187490[chr19:2166046]
Enhancers that have rs563187490[chr19:2166046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2165405 2178635 enh32873
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Blood (T-cell) Heart
Transcript factors that have rs563187490[chr19:2166046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2163064 2166205 ZNF274 GTRD no Blood (GM12878) 108357948
chr19 2163126 2166343 ZNF274 GTRD no Blood (GM12878) 108357952
chr19 2163166 2170011 ZNF274 GTRD no Blood (GM12878) 108357953
chr19 2163166 2170011 ZNF274 GTRD no Blood (GM12878) 108357954
chr19 2163166 2170011 ZNF274 GTRD no Blood (GM12878) 108357955
chr19 2163166 2170011 ZNF274 GTRD no Blood (GM12878) 108357956
chr19 2163240 2166101 ZNF274 GTRD no Bone Marrow (K562) 21834758
chr19 2163240 2166101 ZNF274 GTRD no Bone Marrow (K562) 108357958
chr19 2163272 2169705 ZNF274 GTRD no Blood (GM12878) 108357964
chr19 2163272 2169705 ZNF274 GTRD no Blood (GM12878) 108357965
chr19 2163272 2169705 ZNF274 GTRD no Blood (GM12878) 108357966
chr19 2163272 2169705 ZNF274 GTRD no Blood (GM12878) 108357967
chr19 2163352 2166047 ZNF274 GTRD no Bone Marrow (K562) 21834765
chr19 2163352 2166047 ZNF274 GTRD no Bone Marrow (K562) 108357973
chr19 2164307 2166411 ZNF143 GTRD no Epithelial (MCF-7) 108357988
chr19 2164583 2166062 ZNF274 GTRD no Blood (GM12878) 108357994
chr19 2164596 2166068 ZNF274 GTRD no Liver (HepG2) 21834775
chr19 2164596 2166068 ZNF274 GTRD no Liver (HepG2) 108357996
chr19 2164900 2166445 TCF7L2 GTRD no Colon (HCT116) 21834791
chr19 2164900 2166445 TCF7L2 GTRD no Colon (HCT116) 108358036
chr19 2164955 2166224 TCF7L2 GTRD no Colon (HCT116) 21834799
chr19 2164955 2166224 TCF7L2 GTRD no Colon (HCT116) 108358053
chr19 2165618 2166328 TCF7L2 GTRD no Colon (HCT116) 21834839
chr19 2165618 2166328 TCF7L2 GTRD no Colon (HCT116) 108358155
chr19 2166033 2166052 PITX2 TRANSFAC yes 112052723
chr19 2166039 2166052 ZBTB18 JASPAR yes 112052724
chr19 2166040 2166052 PKNOX1 JASPAR yes 112052725
chr19 2166040 2166052 TGIF1 JASPAR yes 112052726
chr19 2166041 2166050 SNAI2 JASPAR yes 112052727
chr19 2166041 2166051 FIGLA JASPAR yes 112052728
chr19 2166041 2166051 ID4 JASPAR yes 112052729
chr19 2166041 2166051 TCF3 JASPAR yes 112052730
chr19 2166041 2166051 TCF4 JASPAR yes 112052731
chr19 2166043 2166052 ZEB1 JASPAR yes 112052732
chr19 2166043 2166053 TBX21 JASPAR yes 112052733
chr19 2166044 2166052 MGA JASPAR yes 112052734
chr19 2166044 2166052 TBX15 JASPAR yes 112052735
chr19 2166044 2166052 TBX1 JASPAR yes 112052736
chr19 2166044 2166052 TBX4 JASPAR yes 112052737
chr19 2166044 2166052 TBX5 JASPAR yes 112052738
chr19 2166044 2166054 TBR1 JASPAR yes 112052739
chr19 2166044 2166057 SMAD2 JASPAR yes 112052740
Genes associated with rs563187490[chr19:2166046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More