EnhancerDB
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  3. rs56331310[chr1:89340180]
Enhancers that have rs56331310[chr1:89340180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 89337745 89345348 enh74298
Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Lung (PC-9) Stomach
chr1 89339924 89340210 vista2351
VISTA
Transcript factors that have rs56331310[chr1:89340180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 89340170 89340180 ALX3 JASPAR yes 30582652
chr1 89340170 89340180 EMX1 JASPAR yes 30582653
chr1 89340170 89340180 EMX2 JASPAR yes 30582654
chr1 89340170 89340180 ESX1 JASPAR yes 30582655
chr1 89340170 89340180 GBX2 JASPAR yes 30582656
chr1 89340170 89340180 GSX1 JASPAR yes 30582657
chr1 89340170 89340180 GSX2 JASPAR yes 30582658
chr1 89340170 89340180 HESX1 JASPAR yes 30582659
chr1 89340170 89340180 HOXB2 JASPAR yes 30582660
chr1 89340170 89340180 HOXB3 JASPAR yes 30582661
chr1 89340170 89340180 LBX2 JASPAR yes 30582662
chr1 89340170 89340180 LHX2 JASPAR yes 30582663
chr1 89340170 89340180 LHX6 JASPAR yes 30582664
chr1 89340170 89340180 MEOX1 JASPAR yes 30582665
chr1 89340170 89340180 MEOX2 JASPAR yes 30582666
chr1 89340170 89340180 MIXL1 JASPAR yes 30582667
chr1 89340170 89340180 MNX1 JASPAR yes 30582668
chr1 89340170 89340180 NOTO JASPAR yes 30582669
chr1 89340170 89340180 RAX JASPAR yes 30582670
chr1 89340170 89340180 ALX3 JASPAR yes 118323886
chr1 89340170 89340180 EMX1 JASPAR yes 118323887
chr1 89340170 89340180 EMX2 JASPAR yes 118323888
chr1 89340170 89340180 ESX1 JASPAR yes 118323889
chr1 89340170 89340180 GBX2 JASPAR yes 118323890
chr1 89340170 89340180 GSX1 JASPAR yes 118323891
chr1 89340170 89340180 GSX2 JASPAR yes 118323892
chr1 89340170 89340180 HESX1 JASPAR yes 118323893
chr1 89340170 89340180 HOXB2 JASPAR yes 118323894
chr1 89340170 89340180 HOXB3 JASPAR yes 118323895
chr1 89340170 89340180 LBX2 JASPAR yes 118323896
chr1 89340170 89340180 LHX2 JASPAR yes 118323897
chr1 89340170 89340180 LHX6 JASPAR yes 118323898
chr1 89340170 89340180 MEOX1 JASPAR yes 118323899
chr1 89340170 89340180 MEOX2 JASPAR yes 118323900
chr1 89340170 89340180 MIXL1 JASPAR yes 118323901
chr1 89340170 89340180 MNX1 JASPAR yes 118323902
chr1 89340170 89340180 NOTO JASPAR yes 118323903
chr1 89340170 89340180 RAX JASPAR yes 118323904
chr1 89340171 89340181 HOXD13 JASPAR yes 30582691
chr1 89340171 89340181 HOXD13 JASPAR yes 118323925
chr1 89340171 89340184 DUXA JASPAR yes 30582692
chr1 89340171 89340184 DUXA JASPAR yes 118323926
chr1 89340172 89340183 DUX4 JASPAR yes 30582693
chr1 89340172 89340183 PHOX2A JASPAR yes 30582694
chr1 89340172 89340183 PROP1 JASPAR yes 30582695
chr1 89340172 89340183 DUX4 JASPAR yes 118323927
chr1 89340172 89340183 PHOX2A JASPAR yes 118323928
chr1 89340172 89340183 PROP1 JASPAR yes 118323929
chr1 89340174 89340195 IRF1 JASPAR yes 30582696
chr1 89340174 89340195 IRF1 JASPAR yes 118323930
chr1 89340175 89340196 IRF1 JASPAR yes 30582697
chr1 89340175 89340196 IRF1 JASPAR yes 118323931
chr1 89340177 89340198 IRF1 JASPAR yes 30582698
chr1 89340177 89340198 IRF1 JASPAR yes 118323932
chr1 89340178 89340199 IRF1 JASPAR yes 30582699
chr1 89340178 89340199 IRF1 JASPAR yes 118323933
chr1 89340179 89340194 FOXP1 JASPAR yes 30582700
chr1 89340179 89340194 FOXP1 JASPAR yes 118323934
chr1 89340179 89340200 IRF1 JASPAR yes 30582701
chr1 89340179 89340200 IRF1 JASPAR yes 118323935
chr1 89340180 89340195 FOXP1 JASPAR yes 30582702
chr1 89340180 89340195 FOXP1 JASPAR yes 118323936
chr1 89340180 89340201 IRF1 JASPAR yes 30582703
chr1 89340180 89340201 IRF1 JASPAR yes 118323937
Genes associated with rs56331310[chr1:89340180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More