EnhancerDB
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  3. rs563556888[chr1:3374684]
Enhancers that have rs563556888[chr1:3374684]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3372785 3379455 enh11430
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Pancreas Muscle (Myotube)
Transcript factors that have rs563556888[chr1:3374684]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3373584 3375371 TCF7L2 GTRD no Colon (HCT116) 107801859
chr1 3374678 3374688 MAX JASPAR yes 26289896
chr1 3374678 3374690 HES5 JASPAR yes 26289897
chr1 3374678 3374690 HES7 JASPAR yes 26289898
chr1 3374679 3374689 BHLHE40 JASPAR yes 26289899
chr1 3374679 3374689 BHLHE41 JASPAR yes 26289900
chr1 3374679 3374689 CLOCK JASPAR yes 26289901
chr1 3374679 3374689 HEY1 JASPAR yes 26289902
chr1 3374679 3374689 HEY2 JASPAR yes 26289903
chr1 3374679 3374689 MAX JASPAR yes 26289904
chr1 3374679 3374689 MLXIPL JASPAR yes 26289905
chr1 3374679 3374689 MLX JASPAR yes 26289906
chr1 3374679 3374689 MNT JASPAR yes 26289907
chr1 3374679 3374689 TFE3 JASPAR yes 26289908
chr1 3374679 3374689 TFEB JASPAR yes 26289909
chr1 3374679 3374689 TFEC JASPAR yes 26289910
chr1 3374680 3374700 TP63 JASPAR yes 26289911
chr1 3374681 3374686 MYC TRANSFAC yes 26289912
chr1 3374681 3374686 USF1 TRANSFAC yes 26289913
chr1 3374681 3374686 USF2 TRANSFAC yes 26289914
chr1 3374681 3374699 TP73 JASPAR yes 26289915
chr1 3374682 3374697 TP53 JASPAR yes 26289916
chr1 3374683 3374698 TP53 JASPAR yes 26289917
Genes associated with rs563556888[chr1:3374684], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More