EnhancerDB
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  3. rs563669501[chr1:116854833]
Enhancers that have rs563669501[chr1:116854833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563669501[chr1:116854833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116852222 116855719 ZNF143 GTRD no Epithelial (MCF-7) 21331958
chr1 116852458 116856181 ZNF274 GTRD no Cervix (HeLa-S3) 21331960
chr1 116852657 116856456 ZNF143 GTRD no Epithelial (MCF-7) 21331961
chr1 116852789 116856632 ZNF143 GTRD no Epithelial (MCF-7) 21331966
chr1 116853706 116856589 ZNF143 GTRD no Epithelial (MCF-7) 21332039
chr1 116853853 116854961 ZNF143 GTRD no Epithelial (MCF-7) 21332049
chr1 116854405 116855061 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332058
chr1 116854440 116854936 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332059
chr1 116854489 116855059 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332060
chr1 116854696 116855266 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21332061
chr1 116854825 116854833 RHOXF1 JASPAR yes 31792947
chr1 116854826 116854836 PAX3 JASPAR yes 31792948
chr1 116854826 116854836 PAX7 JASPAR yes 31792949
chr1 116854826 116854838 YY1 JASPAR yes 31792950
chr1 116854831 116854835 YY1 TRANSFAC yes 31792951
Genes associated with rs563669501[chr1:116854833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More