EnhancerDB
  1. Home
  2. SNP
  3. rs563817649[chr17:60248599]
Enhancers that have rs563817649[chr17:60248599]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs563817649[chr17:60248599]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60248578 60248599 IRF1 JASPAR yes 55189245
chr17 60248582 60248603 IRF1 JASPAR yes 55189247
chr17 60248586 60248601 STAT2 JASPAR yes 55189249
chr17 60248586 60248607 IRF1 JASPAR yes 55189250
chr17 60248587 60248602 FOXP1 JASPAR yes 55189251
chr17 60248587 60248608 IRF1 JASPAR yes 55189252
chr17 60248592 60248607 FOXP1 JASPAR yes 55189253
chr17 60248593 60248604 FOXA1 JASPAR yes 55189254
chr17 60248595 60248606 FOXP2 JASPAR yes 55189255
Genes associated with rs563817649[chr17:60248599], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More