EnhancerDB
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  3. rs563939409[chr6:42341067]
Enhancers that have rs563939409[chr6:42341067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs563939409[chr6:42341067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42341054 42341072 RARA JASPAR yes 101714095
chr6 42341064 42341084 ESR1 JASPAR yes 101714099
chr6 42341067 42341087 PPARG JASPAR yes 101714100
Genes associated with rs563939409[chr6:42341067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More