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- rs56396882[chr1:201463959]
Enhancers that have rs56396882[chr1:201463959]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
201463125 |
201475335 |
enh12520 |
|
|
Transcript factors that have rs56396882[chr1:201463959]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
201460422
|
201464497
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21364347
|
|
|
chr1
|
201460422
|
201464497
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107856348
|
|
|
chr1
|
201462585
|
201464790
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107856352
|
|
|
chr1
|
201462641
|
201464129
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107856356
|
|
|
chr1
|
201462906
|
201464337
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21364356
|
|
|
chr1
|
201462906
|
201464337
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107856374
|
|
|
chr1
|
201463402
|
201464184
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107856379
|
|
|
chr1
|
201463948
|
201463968
|
RREB1
|
JASPAR
|
yes
|
|
34498093
|
|
Genes associated with rs56396882[chr1:201463959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |