EnhancerDB
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  3. rs563978909[chr1:232103742]
Enhancers that have rs563978909[chr1:232103742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232100855 232112335 enh43185
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs563978909[chr1:232103742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232103740 232103748 ISX JASPAR yes 36128129
chr1 232103740 232103748 LHX9 JASPAR yes 36128130
chr1 232103740 232103748 LMX1B JASPAR yes 36128131
chr1 232103740 232103748 PRRX1 JASPAR yes 36128132
chr1 232103740 232103748 RAX2 JASPAR yes 36128133
chr1 232103740 232103748 SHOX JASPAR yes 36128134
chr1 232103740 232103748 UNCX JASPAR yes 36128135
chr1 232103740 232103756 POU4F2 JASPAR yes 36128136
chr1 232103740 232103756 POU4F3 JASPAR yes 36128137
chr1 232103742 232103756 POU4F1 JASPAR yes 36128138
chr1 232103742 232103757 HNF1A JASPAR yes 36128139
Genes associated with rs563978909[chr1:232103742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More