EnhancerDB
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  3. rs56403476[chr1:25345543]
Enhancers that have rs56403476[chr1:25345543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs56403476[chr1:25345543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25345411 25345811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802482
chr1 25345533 25345551 NFYA JASPAR yes 27554189
chr1 25345539 25345554 NFYB JASPAR yes 27554190
Genes associated with rs56403476[chr1:25345543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More