EnhancerDB
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  3. rs564225765[chr1:42357455]
Enhancers that have rs564225765[chr1:42357455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs564225765[chr1:42357455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42357446 42357456 EMX1 JASPAR yes 28434398
chr1 42357446 42357456 EMX2 JASPAR yes 28434399
chr1 42357446 42357456 EN2 JASPAR yes 28434400
chr1 42357446 42357456 EVX1 JASPAR yes 28434401
chr1 42357446 42357456 EVX2 JASPAR yes 28434402
chr1 42357446 42357456 GBX1 JASPAR yes 28434403
chr1 42357446 42357456 GSX1 JASPAR yes 28434404
chr1 42357446 42357456 GSX2 JASPAR yes 28434405
chr1 42357446 42357456 HOXA2 JASPAR yes 28434406
chr1 42357446 42357456 HOXB2 JASPAR yes 28434407
chr1 42357446 42357456 HOXB3 JASPAR yes 28434408
chr1 42357446 42357456 MEOX1 JASPAR yes 28434409
chr1 42357446 42357456 MEOX2 JASPAR yes 28434410
chr1 42357446 42357456 MIXL1 JASPAR yes 28434411
chr1 42357447 42357455 LMX1A JASPAR yes 28434412
chr1 42357447 42357455 LMX1B JASPAR yes 28434413
chr1 42357447 42357455 NKX6-1 JASPAR yes 28434414
chr1 42357447 42357455 NKX6-2 JASPAR yes 28434415
chr1 42357447 42357455 PDX1 JASPAR yes 28434416
chr1 42357447 42357455 VAX1 JASPAR yes 28434417
chr1 42357447 42357455 VAX2 JASPAR yes 28434418
chr1 42357447 42357455 VSX1 JASPAR yes 28434419
chr1 42357447 42357460 DUXA JASPAR yes 28434420
chr1 42357448 42357459 PHOX2A JASPAR yes 28434421
Genes associated with rs564225765[chr1:42357455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More