EnhancerDB
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  3. rs564390010[chr1:42141731]
Enhancers that have rs564390010[chr1:42141731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs564390010[chr1:42141731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42141711 42141732 IRF1 JASPAR yes 28408712
chr1 42141713 42141734 ZNF263 JASPAR yes 28408715
chr1 42141716 42141737 IRF1 JASPAR yes 28408716
chr1 42141717 42141732 FOXP1 JASPAR yes 28408717
chr1 42141717 42141738 IRF1 JASPAR yes 28408718
chr1 42141721 42141742 IRF1 JASPAR yes 28408719
chr1 42141723 42141738 PRDM1 JASPAR yes 28408720
chr1 42141723 42141738 STAT2 JASPAR yes 28408721
chr1 42141724 42141738 SPIC JASPAR yes 28408722
chr1 42141724 42141738 STAT1 JASPAR yes 28408723
chr1 42141726 42141741 FOXP1 JASPAR yes 28408724
chr1 42141728 42141743 FOXP1 JASPAR yes 28408725
Genes associated with rs564390010[chr1:42141731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More