-
Home
- SNP
- rs564397001[chr12:53288799]
Enhancers that have rs564397001[chr12:53288799]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
53287185 |
53291335 |
enh109553 |
|
|
Transcript factors that have rs564397001[chr12:53288799]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
53287534
|
53288950
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108034876
|
|
|
chr12
|
53287920
|
53289492
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108034877
|
|
|
chr12
|
53288778
|
53288799
|
IRF1
|
JASPAR
|
yes
|
|
120960717
|
|
|
chr12
|
53288778
|
53288799
|
ZNF263
|
JASPAR
|
yes
|
|
120960718
|
|
|
chr12
|
53288782
|
53288803
|
IRF1
|
JASPAR
|
yes
|
|
120960719
|
|
|
chr12
|
53288782
|
53288803
|
ZNF263
|
JASPAR
|
yes
|
|
120960720
|
|
|
chr12
|
53288786
|
53288807
|
IRF1
|
JASPAR
|
yes
|
|
120960721
|
|
|
chr12
|
53288786
|
53288807
|
ZNF263
|
JASPAR
|
yes
|
|
120960722
|
|
|
chr12
|
53288790
|
53288811
|
IRF1
|
JASPAR
|
yes
|
|
120960723
|
|
|
chr12
|
53288790
|
53288811
|
ZNF263
|
JASPAR
|
yes
|
|
120960724
|
|
|
chr12
|
53288791
|
53289799
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108034878
|
|
|
chr12
|
53288794
|
53288815
|
IRF1
|
JASPAR
|
yes
|
|
120960725
|
|
|
chr12
|
53288794
|
53288815
|
ZNF263
|
JASPAR
|
yes
|
|
120960726
|
|
|
chr12
|
53288798
|
53288819
|
IRF1
|
JASPAR
|
yes
|
|
120960727
|
|
|
chr12
|
53288798
|
53288819
|
ZNF263
|
JASPAR
|
yes
|
|
120960728
|
|
Genes associated with rs564397001[chr12:53288799], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |