EnhancerDB
  1. Home
  2. SNP
  3. rs564445681[chr1:54734477]
Enhancers that have rs564445681[chr1:54734477]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs564445681[chr1:54734477]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54734463 54734477 GLIS2 JASPAR yes 28966768
chr1 54734463 54734477 GLIS3 JASPAR yes 28966769
chr1 54734463 54734478 NR2C2 JASPAR yes 28966770
Genes associated with rs564445681[chr1:54734477], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More