EnhancerDB
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  3. rs564528940[chr1:17227093]
Enhancers that have rs564528940[chr1:17227093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs564528940[chr1:17227093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17227091 17227103 MEF2D JASPAR yes 27063450
chr1 17227093 17227107 ONECUT2 JASPAR yes 27063451
chr1 17227093 17227107 ONECUT3 JASPAR yes 27063452
chr1 17227093 17227108 FOXP1 JASPAR yes 27063453
Genes associated with rs564528940[chr1:17227093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More