EnhancerDB
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  3. rs564874848[chr1:2477949]
Enhancers that have rs564874848[chr1:2477949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2471065 2481828 enh9
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr1 2477415 2477971 vista78
VISTA
Transcript factors that have rs564874848[chr1:2477949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801828
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801829
chr1 2477947 2477952 SP1 TRANSFAC yes 26243971
chr1 2477947 2477952 SP1 TRANSFAC yes 118216993
chr1 2477948 2477953 SP1 TRANSFAC yes 26243972
chr1 2477948 2477953 SP1 TRANSFAC yes 118216994
chr1 2477949 2477961 GLI2 JASPAR yes 26243973
chr1 2477949 2477961 GLI2 JASPAR yes 118216995
Genes associated with rs564874848[chr1:2477949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More