EnhancerDB
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  3. rs565172747[chr1:117019035]
Enhancers that have rs565172747[chr1:117019035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565172747[chr1:117019035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 21332839
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 107824269
chr1 117018827 117019377 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332889
chr1 117018939 117019339 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332890
chr1 117018951 117019391 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332891
chr1 117018979 117019349 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332892
chr1 117019001 117019377 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332893
chr1 117019012 117019376 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332894
chr1 117019015 117019411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332895
chr1 117019017 117019321 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332896
chr1 117019022 117019332 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332897
chr1 117019031 117019042 YY2 JASPAR yes 31810994
Genes associated with rs565172747[chr1:117019035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More