EnhancerDB
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  3. rs565493600[chr1:33804348]
Enhancers that have rs565493600[chr1:33804348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33797825 33814983 enh221
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Bone (Osteoblast) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs565493600[chr1:33804348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33804030 33804700 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802806
chr1 33804030 33804700 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802807
chr1 33804333 33804348 HNF4G JASPAR yes 28041988
chr1 33804333 33804348 NR2C2 JASPAR yes 28041989
chr1 33804334 33804348 NR2F1 JASPAR yes 28041990
chr1 33804343 33804350 GATA1 TRANSFAC yes 28041991
chr1 33804346 33804350 TEAD2 TRANSFAC yes 28041992
chr1 33804347 33804356 NKX3-2 JASPAR yes 28041993
Genes associated with rs565493600[chr1:33804348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More