EnhancerDB
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  3. rs565909834[chr1:42124968]
Enhancers that have rs565909834[chr1:42124968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs565909834[chr1:42124968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42124959 42124973 GLIS2 JASPAR yes 28406363
chr1 42124963 42124970 USF1 JASPAR yes 28406364
chr1 42124964 42124969 MYC TRANSFAC yes 28406365
chr1 42124964 42124969 USF1 TRANSFAC yes 28406366
chr1 42124964 42124969 USF2 TRANSFAC yes 28406367
Genes associated with rs565909834[chr1:42124968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More