EnhancerDB
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  3. rs566072585[chr1:116858440]
Enhancers that have rs566072585[chr1:116858440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs566072585[chr1:116858440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116858105 116859632 ZNF143 GTRD no Epithelial (MCF-7) 21332083
chr1 116858312 116859637 ZNF143 GTRD no Epithelial (MCF-7) 21332084
chr1 116858329 116859546 ZNF143 GTRD no Epithelial (MCF-7) 21332085
chr1 116858355 116859750 ZNF143 GTRD no Epithelial (MCF-7) 21332086
chr1 116858363 116858653 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332087
chr1 116858368 116858648 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332088
chr1 116858381 116859488 ZNF143 GTRD no Epithelial (MCF-7) 21332089
chr1 116858382 116859768 ZNF143 GTRD no Epithelial (MCF-7) 21332090
chr1 116858397 116859772 ZNF143 GTRD no Epithelial (MCF-7) 21332091
chr1 116858399 116859581 ZNF143 GTRD no Epithelial (MCF-7) 21332092
chr1 116858416 116859771 ZNF143 GTRD no Epithelial (MCF-7) 21332093
chr1 116858433 116858451 NR3C1 JASPAR yes 31793623
Genes associated with rs566072585[chr1:116858440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More