EnhancerDB
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  3. rs566272442[chr12:47348513]
Enhancers that have rs566272442[chr12:47348513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47334386 47348895 enh29554
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Astrocyte Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs566272442[chr12:47348513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47348232 47349024 ZNF143 GTRD no Epithelial (MCF-7) 21542912
chr12 47348241 47348852 ZNF143 GTRD no Epithelial (MCF-7) 21542913
chr12 47348431 47348880 ZNF143 GTRD no Epithelial (MCF-7) 21542914
chr12 47348444 47349038 ZNF143 GTRD no Epithelial (MCF-7) 21542915
chr12 47348453 47348781 ZNF143 GTRD no Epithelial (MCF-7) 21542916
chr12 47348467 47349020 ZNF143 GTRD no Epithelial (MCF-7) 21542917
chr12 47348482 47348900 ZNF143 GTRD no Epithelial (MCF-7) 21542918
chr12 47348506 47348514 ISL2 JASPAR yes 120662783
chr12 47348513 47348516 MYB TRANSFAC yes 120662784
Genes associated with rs566272442[chr12:47348513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More