EnhancerDB
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  3. rs566425060[chr1:200423570]
Enhancers that have rs566425060[chr1:200423570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs566425060[chr1:200423570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200423029 200423653 ZNF143 GTRD no Epithelial (MCF-7) 21363595
chr1 200423550 200423571 IRF1 JASPAR yes 34450040
chr1 200423551 200423572 IRF1 JASPAR yes 34450042
chr1 200423555 200423576 IRF1 JASPAR yes 34450044
chr1 200423556 200423571 FOXP1 JASPAR yes 34450045
chr1 200423556 200423577 IRF1 JASPAR yes 34450046
chr1 200423560 200423581 IRF1 JASPAR yes 34450047
chr1 200423561 200423576 FOXP1 JASPAR yes 34450048
chr1 200423563 200423578 FOXP1 JASPAR yes 34450049
chr1 200423565 200423580 FOXP1 JASPAR yes 34450050
chr1 200423566 200423581 FOXP1 JASPAR yes 34450051
chr1 200423567 200423582 FOXP1 JASPAR yes 34450052
Genes associated with rs566425060[chr1:200423570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More