EnhancerDB
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  3. rs566511426[chr1:200258918]
Enhancers that have rs566511426[chr1:200258918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs566511426[chr1:200258918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200258074 200259012 ZNF143 GTRD no Epithelial (MCF-7) 21362759
chr1 200258150 200259011 ZNF143 GTRD no Epithelial (MCF-7) 21362760
chr1 200258173 200259083 ZNF143 GTRD no Epithelial (MCF-7) 21362761
chr1 200258183 200259003 ZNF143 GTRD no Epithelial (MCF-7) 21362762
chr1 200258194 200258926 ZNF143 GTRD no Epithelial (MCF-7) 21362763
chr1 200258197 200259776 ZNF143 GTRD no Epithelial (MCF-7) 21362764
chr1 200258211 200259218 ZNF143 GTRD no Epithelial (MCF-7) 21362765
chr1 200258221 200259023 ZNF274 GTRD no Liver (HepG2) 21362767
chr1 200258297 200259018 ZNF274 GTRD no Blood (GM12878) 21362768
chr1 200258303 200259012 ZNF274 GTRD no Blood (GM12878) 21362770
chr1 200258308 200258945 ZNF143 GTRD no Epithelial (MCF-7) 21362771
chr1 200258357 200258951 ZNF143 GTRD no Epithelial (MCF-7) 21362775
chr1 200258392 200258966 ZNF274 GTRD no Blood (GM12878) 21362778
chr1 200258908 200258918 SP1 JASPAR yes 34429780
chr1 200258915 200258930 FOXP1 JASPAR yes 34429781
chr1 200258916 200258931 FOXP1 JASPAR yes 34429782
chr1 200258917 200258932 FOXP1 JASPAR yes 34429783
chr1 200258917 200258938 IRF1 JASPAR yes 34429784
chr1 200258918 200258933 FOXP1 JASPAR yes 34429785
chr1 200258918 200258939 IRF1 JASPAR yes 34429786
Genes associated with rs566511426[chr1:200258918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More