EnhancerDB
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  3. rs566564485[chr17:77890318]
Enhancers that have rs566564485[chr17:77890318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs566564485[chr17:77890318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77889653 77891360 TCF7L2 GTRD no Colon (HCT116) 21796574
chr17 77889742 77890398 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21796576
chr17 77889776 77890346 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21796578
chr17 77889812 77890782 ZNF143 GTRD no Epithelial (MCF-7) 21796582
chr17 77889834 77890484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796583
chr17 77889871 77890767 ZNF143 GTRD no Epithelial (MCF-7) 21796589
chr17 77889952 77890744 ZNF143 GTRD no Epithelial (MCF-7) 21796601
chr17 77889973 77890595 TCF7L2 GTRD no Colon (HCT116) 21796603
chr17 77889975 77890335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21796604
chr17 77890226 77890759 ZNF274 GTRD no Liver (HepG2) 21796617
chr17 77890255 77890790 ZNF143 GTRD no Epithelial (MCF-7) 21796618
chr17 77890256 77890759 ZNF143 GTRD no Epithelial (MCF-7) 21796619
chr17 77890311 77890748 ZNF143 GTRD no Epithelial (MCF-7) 21796620
chr17 77890312 77890323 YY2 JASPAR yes 56228380
chr17 77890318 77890322 YY1 TRANSFAC yes 56228381
Genes associated with rs566564485[chr17:77890318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More