EnhancerDB
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  3. rs566709870[chr17:40769178]
Enhancers that have rs566709870[chr17:40769178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40767925 40773235 enh48036
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs566709870[chr17:40769178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40769172 40769183 CDX2 JASPAR yes 54312092
chr17 40769173 40769184 HOXA10 JASPAR yes 54312093
chr17 40769174 40769183 CDX1 JASPAR yes 54312094
chr17 40769174 40769184 HOXA13 JASPAR yes 54312095
chr17 40769174 40769184 HOXB13 JASPAR yes 54312096
chr17 40769174 40769184 HOXD13 JASPAR yes 54312097
chr17 40769174 40769189 MEF2C JASPAR yes 54312098
chr17 40769175 40769190 MEF2A JASPAR yes 54312099
chr17 40769176 40769188 MEF2A JASPAR yes 54312100
chr17 40769176 40769188 MEF2B JASPAR yes 54312101
chr17 40769176 40769188 MEF2D JASPAR yes 54312102
chr17 40769177 40769187 MEF2A JASPAR yes 54312103
Genes associated with rs566709870[chr17:40769178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More