EnhancerDB
  1. Home
  2. SNP
  3. rs566713339[chr18:57580717]
Enhancers that have rs566713339[chr18:57580717]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs566713339[chr18:57580717]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57580213 57581047 ZNF274 GTRD no Cervix (HeLa-S3) 21824901
chr18 57580325 57581067 TCF7L2 GTRD no Colon (HCT116) 21824902
chr18 57580385 57580945 ZNF274 GTRD no Bone Marrow (K562) 21824903
chr18 57580398 57580724 ZNF274 GTRD no Bone Marrow (K562) 21824904
chr18 57580436 57580728 ZNF274 GTRD no Cervix (HeLa-S3) 21824905
chr18 57580519 57581086 TCF7L2 GTRD no Colon (HCT116) 21824906
chr18 57580711 57580732 IRF1 JASPAR yes 111063854
chr18 57580712 57580733 IRF1 JASPAR yes 111063855
chr18 57580713 57580728 STAT2 JASPAR yes 111063856
chr18 57580713 57580734 IRF1 JASPAR yes 111063857
chr18 57580717 57580732 FOXP1 JASPAR yes 111063858
Genes associated with rs566713339[chr18:57580717], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More