EnhancerDB
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Enhancers that have rs566790552[chr1:109693943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109689565 109697095 enh27058
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Stomach Muscle (A673) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr1 109693905 109693990 vista2842
VISTA
Transcript factors that have rs566790552[chr1:109693943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109693679 109694168 ZNF263 UCSC Txn Factor no Conserved 107819056
chr1 109693757 109694327 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326796
chr1 109693757 109694327 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107819057
chr1 109693769 109694139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819058
chr1 109693772 109694052 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819059
chr1 109693780 109694060 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819060
chr1 109693800 109694080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819061
chr1 109693817 109694201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326797
chr1 109693817 109694201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107819062
chr1 109693822 109694112 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107819063
chr1 109693827 109694317 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107819064
chr1 109693853 109694163 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21326798
chr1 109693853 109694163 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107819065
chr1 109693871 109694055 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819066
chr1 109693894 109693964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819067
chr1 109693929 109693943 EBF1 JASPAR yes 31411902
chr1 109693929 109693943 EBF1 JASPAR yes 118346422
chr1 109693935 109693956 ZNF263 JASPAR yes 31411903
chr1 109693935 109693956 ZNF263 JASPAR yes 118346423
chr1 109693937 109693958 ZNF263 JASPAR yes 31411904
chr1 109693937 109693958 ZNF263 JASPAR yes 118346424
chr1 109693941 109693951 SP1 JASPAR yes 31411905
chr1 109693941 109693951 SP1 JASPAR yes 118346425
Genes associated with rs566790552[chr1:109693943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More