EnhancerDB
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  3. rs56690260[chr2:216420335]
Enhancers that have rs56690260[chr2:216420335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216411385 216447008 enh6143
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Stomach
Transcript factors that have rs56690260[chr2:216420335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216420332 216420347 HNF1A JASPAR yes 80780803
chr2 216420333 216420343 GSX1 JASPAR yes 80780804
chr2 216420333 216420343 GSX2 JASPAR yes 80780805
chr2 216420333 216420343 HOXA2 JASPAR yes 80780806
chr2 216420333 216420343 HOXB2 JASPAR yes 80780807
chr2 216420333 216420343 HOXB3 JASPAR yes 80780808
chr2 216420333 216420343 LHX2 JASPAR yes 80780809
chr2 216420333 216420343 MEOX1 JASPAR yes 80780810
chr2 216420333 216420343 MEOX2 JASPAR yes 80780811
chr2 216420333 216420343 NOTO JASPAR yes 80780812
chr2 216420333 216420346 HNF1B JASPAR yes 80780813
chr2 216420334 216420342 NKX6-1 JASPAR yes 80780814
chr2 216420334 216420342 NKX6-2 JASPAR yes 80780815
chr2 216420334 216420344 POU6F2 JASPAR yes 80780816
Genes associated with rs56690260[chr2:216420335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More